buried cinema clustal clustal2 helix hydrophobicity lesk mae strand taylor turn zappo

Q  117 NWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTY
        + + S + T + F+
T 1569 GKGKPQEEQGPSGSSKKASCSPADLQKVQEQCQAALQTPAWAECA---------SRVDLRPFLLDCMNSLCEFRG-----
Q  197 HPNCVNCLDDRCILHCA-NFNVLFSTV-------FPPTS-----------FGPLVRKIFVD-----------------GV
        + + + + + L
T 1649 --------SLQPLCKALQALGAACRSKGLQPPIWRNSSFCPLACPAYSTYTNCLPSCSPSCFDPDGRCEGARAPSSCAEG
Q  277 PFVVSTGYHFRELGV---VHNQDV--NLHSSRLSFKELLVYAAD-----------PAMHAASGNLLLDKR----------
        + V + + + + L+
T 1729 CTCQPGYVLSKNKCVAKDQCSCRDAQGGSIPSGKSWVSSGCSQKCACTEGSIQCRAFHCPSRSHCKLNSNGNSNCVSEKS
Q  357 ----TTC----FSVAAL---TNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLP
        + + + L + +
T 1809 DQCSIFGGPHYRTFDRFSFGFRGRMTYVLIKTV-------------DELPDGVERLLVQARNKMYPPWNK--------VF
Q  437 T------MCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNV
        + Y ++VNN + + + +
T 1889 LQEIITTVYG-----------------YKVQLQRDLVLVVNNQKMAVPYK-------------------------PEDRL
Q  517 IPTITQ-MNL------KYAISAKNRA-----------RTVA--GVSIC-----STMTNR--------QFHQKL---LKSI
        ++ + A + G + N + S+
T 1969 RVSMQGQRLFLITDFEMVVSFDGRNAAVITLPSMYQGLVRGLCGNYDSDRRNEMMLPNGAITTNVDVFGNSWEVKTEDSV
Q  597 AATRGATVVIGTSKF---------------YGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTT
        R A V + K V D + V +
T 2049 LRFRRALQVEADGKEKETGSYRSECSQEQLALVNSTQACRVLVDPQ-------GPFAACHQTVAPEPFQEHCVSDLC-AS
Q  677 CCSLSHRFY---------------------RLANECAQV----LSEMVM----------CGGSL----YVKPGGTSSG
        H + + + ++ G +S
T 2129 RDPKEHEELRCQVLSGYSITCQEAGIALAGWRDHTHCAMVCPANTVYQSCMTPCPESCANLAAPRDCEGPCVEGCASL